1YD9 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AU enzyme
Primary referenceStructural characterization of the histone variant macroH2A., Chakravarthy S, Gundimella SK, Caron C, Perche PY, Pehrson JR, Khochbin S, Luger K, Mol Cell Biol 2005 Sep;25(17):7616-24. PMID:16107708
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (1yd9.pdb1.gz) 32 Kb
  • Biological Unit Coordinates (1yd9.pdb2.gz) 32 Kb
  • Biological Unit Coordinates (1yd9.pdb3.gz) 32 Kb
  • Biological Unit Coordinates (1yd9.pdb4.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 1YD9
  • CSU: Contacts of Structural Units for 1YD9
  • Likely Quarternary Molecular Structure file(s) for 1YD9
  • Structure Factors (1277 Kb)
  • Retrieve 1YD9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YD9 from S2C, [Save to disk]
  • Re-refined 1yd9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1YD9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yd9] [1yd9_A] [1yd9_B] [1yd9_C] [1yd9_D]
  • SWISS-PROT database: [Q02874]
  • Domain found in 1YD9: [A1pp ] by SMART

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