1YHV	Signaling Protein, Transferase	date	Jan 10, 2005
title	Crystal Structure Of Pak1 Kinase Domain With Two Point Mutat (K299r, T423e)
authors	M.Lei, M.A.Robinson, S.C.Harrison
compound		source
Molecule: Serinethreonine-Protein Kinase Pak 1 Chain: A Fragment: Kinase Domain Synonym: P21-Activated Kinase 1; Pak-1; P65-Pak; Alpha-Pak Ec: 2.7.1.37 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pak1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Nb42 Expression_system_vector_type: Pasmid Expression_system_plasmid: Pgex2t
symmetry	Space Group: C 2 2 21	R_factor 0.220 R_Free 0.240
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.962 103.296 122.876 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand		enzyme	Transferase E.C.2.7.1.37 BRENDA
related structures	by homologous chain: 1YHW
Gene Ontology	Chain Function Process Component A
Primary reference	The Active Conformation of the PAK1 Kinase Domain., Lei M, Robinson MA, Harrison SC, Structure (Camb) 2005 May;13(5):769-78. PMID:15893667

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk] Biological Unit Coordinates (1yhv.pdb1.gz) 49 Kb CSU: Contacts of Structural Units for 1YHV Likely Quarternary Molecular Structure file(s) for 1YHV Structure Factors (240 Kb) Retrieve 1YHV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YHV from S2C, [Save to disk] Re-refined 1yhv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YHV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1YHV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1YHV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yhv] [1yhv_A] SWISS-PROT database: [Q13153] Domain organization of [PAK1_HUMAN] by SWISSPFAM Domain found in 1YHV: [S_TKc ] by SMART

Other resources with information on 1YHV

Community annotation for 1YHV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---