1YJ0 Protein And Metal Binding Protein date Jan 11, 2005
title Crystal Structures Of Chicken Annexin V In Complex With Zn2+
authors E.A.Ortlund, G.Chai, B.Genge, L.N.Y.Wu, R.E.Wuthier, L.Lebioda
compound source
Molecule: Annexin A5
Chain: A
Synonym: Annexin V; Lipocortin V; Endonexin II; Calphobindi I; Placental Anticoagulant Protein I; Pap-I; Pp4; Thrombopl Inhibitor; Vascular Anticoagulant-Alpha; Vac-Alpha; Anchori
 Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Other_details: Gene Anxa5, Anx5
symmetry Space Group: P 21 3
R_factor 0.211 R_Free 0.286
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.593 106.593 106.593 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.95 Å
ligand SO4, ZN enzyme
related structures by homologous chain: 1ANX, 1N44
Gene
Ontology
ChainFunctionProcessComponent
A
  • calcium channel activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (1yj0.pdb1.gz) 52 Kb
  • Biological Unit Coordinates (1yj0.pdb2.gz) 153 Kb
  • LPC: Ligand-Protein Contacts for 1YJ0
  • CSU: Contacts of Structural Units for 1YJ0
  • Likely Quarternary Molecular Structure file(s) for 1YJ0
  • Retrieve 1YJ0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YJ0 from S2C, [Save to disk]
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  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1YJ0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1YJ0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yj0_A] [1yj0]
  • SWISS-PROT database: [P17153]
  • Domain organization of [ANXA5_CHICK] by SWISSPFAM
  • Domain found in 1YJ0: [ANX ] by SMART
    • Other resources with information on 1YJ0
  • Community annotation for 1YJ0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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