1YOW	Transcription	date	Jan 28, 2005
title	Human Steroidogenic Factor 1 Lbd With Bound Co-Factor Peptid
authors	I.N.Krylova, E.P.Sablin, R.X.Xu, G.M.Waitt, D.Juzumiene, J.D.Will H.A.Ingraham, T.M.Willson, S.P.Williams, V.Montana, K.P.Madauss J.M.Bynum, L.Lebedeva, J.A.Mackay, M.Suzawa, R.K.Guy, J.W.Thornt
compound		source
Molecule: Steroidogenic Factor 1 Chain: A Synonym: Stf-1, Sf-1, Adrenal 4 Binding Protein, Steroid Ho Receptor Ad4bp, Fushi Tarazu Factor Homolog 1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Nr5a1, Ad4bp, Ftzf1, Sf1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 [De3]
Molecule: Tif2 Peptide Chain: B Engineered: Yes		Synthetic: Yes Other_details: The Peptide Was Chemically Synthesized. The Of The Peptide Is Naturally Found In Homo Sapiens (Human).
symmetry	Space Group: P 41 21 2	R_factor 0.246 R_Free 0.290
crystal cell	length a length b length c angle alpha angle beta angle gamma 73.335 73.335 139.021 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	P0E	enzyme
related structures	by homologous chain: 1ZDU
Gene Ontology	Chain Function Process Component A
Primary reference	Structural analyses reveal phosphatidyl inositols as ligands for the NR5 orphan receptors SF-1 and LRH-1., Krylova IN, Sablin EP, Moore J, Xu RX, Waitt GM, MacKay JA, Juzumiene D, Bynum JM, Madauss K, Montana V, Lebedeva L, Suzawa M, Williams JD, Williams SP, Guy RK, Thornton JW, Fletterick RJ, Willson TM, Ingraham HA, Cell 2005 Feb 11;120(3):343-55. PMID:15707893

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk] Biological Unit Coordinates (1yow.pdb1.gz) 41 Kb LPC: Ligand-Protein Contacts for 1YOW CSU: Contacts of Structural Units for 1YOW Likely Quarternary Molecular Structure file(s) for 1YOW Structure Factors (66 Kb) Retrieve 1YOW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YOW from S2C, [Save to disk] Re-refined 1yow structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YOW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1YOW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1YOW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yow_A] [1yow_B] [1yow] SWISS-PROT database: [Q13285] Domain organization of [STF1_HUMAN] by SWISSPFAM Domain found in 1YOW: [HOLI ] by SMART

Other resources with information on 1YOW

Community annotation for 1YOW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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