1YT3		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	SO4, ZN	enzyme
Gene Ontology	Chain Function Process Component A 3'-5'-exoribonuclease activi... nuclease activity exonuclease activity 3'-5' exonuclease activity ribonuclease D activity
Primary reference	Crystal Structure of Escherichia coli RNase D, an Exoribonuclease Involved in Structured RNA Processing., Zuo Y, Wang Y, Malhotra A, Structure (Camb) 2005 Jul;13(7):973-84. PMID:16004870

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk] Biological Unit Coordinates (1yt3.pdb1.gz) 72 Kb LPC: Ligand-Protein Contacts for 1YT3 CSU: Contacts of Structural Units for 1YT3 Likely Quarternary Molecular Structure file(s) for 1YT3 Structure Factors (804 Kb) Retrieve 1YT3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YT3 from S2C, [Save to disk] Re-refined 1yt3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YT3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yt3] [1yt3_A] SWISS-PROT database: [P09155] Domains found in 1YT3: [35EXOc] [HRDC ] by SMART

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