1YUS Metal Binding Protein date Feb 14, 2005
title Solution Structure Of Apo-S100a13
authors F.Arnesano, L.Banci, I.Bertini, A.Fantoni, L.Tenori, M.S.Viezzoli, Structural Proteomics In Europe (Spine)
compound source
Molecule: S100 Calcium Binding Protein A13
Chain: A, B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: S100a13
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21gold(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet21a
Expression_system_plasmid: Pet21s100
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • mast cell degranulation

  • Primary referenceStructural Interplay between Calcium(II) and Copper(II) Binding to S100A13 Protein., Arnesano F, Banci L, Bertini I, Fantoni A, Tenori L, Viezzoli MS, Angew Chem Int Ed Engl 2005 Oct 7;44(39):6341-6344. PMID:16145699
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1567 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1YUS
  • Original NMR restraints for 1YUS from PDB
  • Retrieve 1YUS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YUS from S2C, [Save to disk]
  • View 1YUS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1YUS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1YUS, from MSDmotif at EBI
  • Fold representative 1yus from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yus_A] [1yus] [1yus_B]
  • SWISS-PROT database: [Q99584]
  • Domain organization of [S10AD_HUMAN] by SWISSPFAM
  • Domain found in 1YUS: [S_100 ] by SMART
  • Other resources with information on 1YUS
  • Community annotation for 1YUS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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