1YXH	Hydrolase	date	Feb 21, 2005
title	Crystal Structure Of A Novel Phospholipase A2 From Naja Naja Sagittifera With A Strong Anticoagulant Activity
authors	T.Jabeen, N.Singh, R.K.Singh, S.Sharma, A.Srinivasan, T.P.Singh
compound		source
Molecule: Phospholipase A2 Chain: A Ec: 3.1.1.4		Organism_scientific: Naja Sagittifera Organism_taxid: 195058
symmetry	Space Group: P 41	R_factor 0.195 R_Free 0.225
crystal cell	length a length b length c angle alpha angle beta angle gamma 42.817 42.817 65.994 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.86 Å
ligand	CA, EOH, PO4	enzyme	Hydrolase E.C.3.1.1.4 BRENDA
related structures	by homologous chain: 1A3D, 1MH8
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of a novel phospholipase A2 from Naja naja sagittifera with a strong anticoagulant activity., Jabeen T, Singh N, Singh RK, Ethayathulla AS, Sharma S, Srinivasan A, Singh TP, Toxicon. 2005 Dec 15;46(8):865-75. Epub 2005 Nov 2. PMID:16269164

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk] Biological Unit Coordinates (1yxh.pdb1.gz) 22 Kb LPC: Ligand-Protein Contacts for 1YXH CSU: Contacts of Structural Units for 1YXH Likely Quarternary Molecular Structure file(s) for 1YXH Retrieve 1YXH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YXH from S2C, [Save to disk]

View 1YXH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1YXH

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1YXH, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yxh] [1yxh_A] SWISS-PROT database: [Q6T179] Domain organization of [PA24_NAJSG] by SWISSPFAM Domain found in 1YXH: [PA2c ] by SMART

Other resources with information on 1YXH

Community annotation for 1YXH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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