1YXM	Oxidoreductase	date	Feb 22, 2005
title	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase
authors	A.Jansson, S.Ng, C.Arrowsmith, S.Sharma, A.M.Edwards, F.Von Delft M.Sundstrom, U.Oppermann, Structural Genomics Consortium (Sgc
compound		source
Molecule: Peroxisomal Trans 2-Enoyl Coa Reductase Chain: A, B, C, D Synonym: Pecra Ec: 1.3.1.8 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pecr Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Hpecr-P11t
symmetry	Space Group: P 21 21 21	R_factor 0.204 R_Free 0.245
crystal cell	length a length b length c angle alpha angle beta angle gamma 78.152 119.014 119.909 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	ADE, PO4, SO4	enzyme	Oxidoreductase E.C.1.3.1.8 BRENDA
related structures	by homologous chain: 1EK5
Gene Ontology	Chain Function Process Component A, D, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (177 Kb) [Save to disk] Biological Unit Coordinates (1yxm.pdb1.gz) 170 Kb LPC: Ligand-Protein Contacts for 1YXM CSU: Contacts of Structural Units for 1YXM Likely Quarternary Molecular Structure file(s) for 1YXM Structure Factors (787 Kb) Retrieve 1YXM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YXM from S2C, [Save to disk] Re-refined 1yxm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YXM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1YXM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1YXM, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yxm_B] [1yxm] [1yxm_A] [1yxm_C] [1yxm_D] SWISS-PROT database: [Q9BY49] Domain organization of [PECR_HUMAN] by SWISSPFAM Domain found in 1YXM: [BCL ] by SMART

Other resources with information on 1YXM

Community annotation for 1YXM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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