1YYE date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 196 BindingDB enzyme
Primary referenceERbeta ligands. 3. Exploiting two binding orientations of the 2-phenylnaphthalene scaffold to achieve ERbeta selectivity., Mewshaw RE, Edsall RJ Jr, Yang C, Manas ES, Xu ZB, Henderson RA, Keith JC Jr, Harris HA, J Med Chem. 2005 Jun 16;48(12):3953-79. PMID:15943471
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk]
  • Biological Unit Coordinates (1yye.pdb1.gz) 80 Kb
  • LPC: Ligand-Protein Contacts for 1YYE
  • CSU: Contacts of Structural Units for 1YYE
  • Likely Quarternary Molecular Structure file(s) for 1YYE
  • Retrieve 1YYE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YYE from S2C, [Save to disk]
  • View 1YYE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yye] [1yye_A] [1yye_B] [1yye_C] [1yye_D]
  • SWISS-PROT database: [Q92731] [Q15788]
  • Domain found in 1YYE: [HOLI ] by SMART

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