1YYF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ADP enzyme
note 1YYF (Molecule of the Month:pdb80)
Gene
Ontology
ChainFunctionProcessComponent
A, B


D, C


Primary referenceCorrection of X-ray intensities from an HslV-HslU co-crystal containing lattice-translocation defects., Wang J, Rho SH, Park HH, Eom SH, Acta Crystallogr D Biol Crystallogr 2005 Jul;61(Pt 7):932-41. Epub 2005, Jun 24. PMID:15983416
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (191 Kb) [Save to disk]
  • Biological Unit Coordinates (1yyf.pdb1.gz) 1080 Kb
  • LPC: Ligand-Protein Contacts for 1YYF
  • CSU: Contacts of Structural Units for 1YYF
  • Likely Quarternary Molecular Structure file(s) for 1YYF
  • Structure Factors (682 Kb)
  • Retrieve 1YYF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YYF from S2C, [Save to disk]
  • Re-refined 1yyf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1YYF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yyf] [1yyf_A] [1yyf_B] [1yyf_C] [1yyf_D]
  • SWISS-PROT database: [P0A6H5] [P39070]
  • Domains found in 1YYF: [AAA] [ClpB_D2-small ] by SMART

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