1YZ3 Transferase date Feb 27, 2005
title Structure Of Human Pnmt Complexed With Cofactor Product Adoh Inhibitor Sk&F 64139
authors Q.Wu, C.L.Gee, F.Lin, J.L.Martin, G.L.Grunewald, M.J.Mcleish
compound source
Molecule: Phenylethanolamine N-Methyltransferase
Chain: A, B
Ec: 2.1.1.28
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet17pnmt-His
symmetry Space Group: P 43 21 2
R_factor 0.214 R_Free 0.243
crystal
cell
length a length b length c angle alpha angle beta angle gamma
93.900 93.900 188.300 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand SAH, SKA BindingDB enzyme Transferase E.C.2.1.1.28 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural, mutagenic, and kinetic analysis of the binding of substrates and inhibitors of human phenylethanolamine N-methyltransferase., Wu Q, Gee CL, Lin F, Tyndall JD, Martin JL, Grunewald GL, McLeish MJ, J Med Chem. 2005 Nov 17;48(23):7243-52. PMID:16279783
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (1yz3.pdb1.gz) 88 Kb
  • LPC: Ligand-Protein Contacts for 1YZ3
  • CSU: Contacts of Structural Units for 1YZ3
  • Likely Quarternary Molecular Structure file(s) for 1YZ3
  • Structure Factors (274 Kb)
  • Retrieve 1YZ3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YZ3 from S2C, [Save to disk]
  • Re-refined 1yz3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1YZ3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1YZ3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1YZ3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yz3_B] [1yz3_A] [1yz3]
  • SWISS-PROT database: [P11086]
  • Domain organization of [PNMT_HUMAN] by SWISSPFAM
  • Other resources with information on 1YZ3
  • Community annotation for 1YZ3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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