1Z00 Hydrolase date Mar 01, 2005
title Solution Structure Of The C-Terminal Domain Of Ercc1 Complex The C-Terminal Domain Of Xpf
authors K.Tripsianes, G.Folkers, E.Ab, D.Das, H.Odijk, N.G.J.Jaspers, J.H.J.Hoeijmakers, R.Kaptein, R.Boelens
compound source
Molecule: Dna Excision Repair Protein Ercc-1
Chain: A
Fragment: C-Terminal Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(Rosetta) Novagen
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28b

Molecule: Dna Repair Endonuclease Xpf
Chain: B
Fragment: C-Terminal Domain
Synonym: Dna Excision Repair Protein Ercc-4, Dna-Repair Pro Complementing Xp-F Cell, Xeroderma Pigmentosum Group F Comp Protein;
Ec: 3.1.-.-
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(Rosetta) Novagen
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28b
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe Structure of the Human ERCC1/XPF Interaction Domains Reveals a Complementary Role for the Two Proteins in Nucleotide Excision Repair., Tripsianes K, Folkers G, Ab E, Das D, Odijk H, Jaspers NG, Hoeijmakers JH, Kaptein R, Boelens R, Structure (Camb) 2005 Dec;13(12):1849-58. PMID:16338413
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (869 Kb) [Save to disk]
  • Biological Unit Coordinates (1z00.pdb1.gz) 43 Kb
  • CSU: Contacts of Structural Units for 1Z00
  • Original NMR restraints for 1Z00 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1Z00 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Z00 from S2C, [Save to disk]
  • View 1Z00 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1Z00
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1Z00, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1z00] [1z00_A] [1z00_B]
  • SWISS-PROT database: [P07992] [Q92889]
  • Domain organization of [ERCC1_HUMAN] [XPF_HUMAN] by SWISSPFAM
  • Domain found in 1Z00: [HhH1 ] by SMART
  • Other resources with information on 1Z00
  • Community annotation for 1Z00 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science