1Z2J Rna date Mar 08, 2005
title Solution Structure Of The Hiv-1 Frameshift Inducing Element
authors D.W.Staple, S.E.Butcher
compound source
Molecule: Hiv-1 Frameshift Site Rna
Chain: A
Engineered: Yes
Synthetic: Yes
Other_details: Rna Was Produced From In Vitro Transcripton Rna Ploymerase From Dna Templates.
methodSolution NMR
Primary referenceSolution structure and thermodynamic investigation of the HIV-1 frameshift inducing element., Staple DW, Butcher SE, J Mol Biol 2005 Jun 24;349(5):1011-23. Epub 2005 Apr 1. PMID:15927637
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (485 Kb) [Save to disk]
  • Biological Unit Coordinates (1z2j.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 1Z2J
  • Original NMR restraints for 1Z2J from PDB
  • Retrieve 1Z2J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Z2J from S2C, [Save to disk]
  • View 1Z2J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1Z2J
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1Z2J, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1z2j_A] [1z2j]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1Z2J
  • Community annotation for 1Z2J at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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