1Z4R Transferase date Mar 16, 2005
title Human Gcn5 Acetyltransferase
authors A.Dong, G.Bernstein, A.Schuetz, T.Antoshenko, H.Wu, P.Loppnau, M.S C.Arrowsmith, A.Edwards, A.Bochkarev, A.Plotnikov, Structural G Consortium (Sgc)
compound source
Molecule: General Control Of Amino Acid Synthesis Protein 5
Chain: A
Fragment: Residues 497-662
Synonym: Histone Acetyltransferase Gcn5, Hsgcn5, Staf97
Ec: 2.3.1.48
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gcn5
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61
R_factor 0.197 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
38.090 38.090 186.340 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.74 Å
ligand ACO enzyme Transferase E.C.2.3.1.48 BRENDA
note 1Z4R is a representative structure
related structures by homologous chain: 1CM0, 1YGH
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of a binary complex between human GCN5 histone acetyltransferase domain and acetyl coenzyme A., Schuetz A, Bernstein G, Dong A, Antoshenko T, Wu H, Loppnau P, Bochkarev A, Plotnikov AN, Proteins. 2007 Jul 1;68(1):403-7. PMID:17410582
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (1z4r.pdb1.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 1Z4R
  • CSU: Contacts of Structural Units for 1Z4R
  • Likely Quarternary Molecular Structure file(s) for 1Z4R
  • Structure Factors (244 Kb)
  • Retrieve 1Z4R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Z4R from S2C, [Save to disk]
  • Re-refined 1z4r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1Z4R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1Z4R
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1Z4R, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1z4r] [1z4r_A]
  • SWISS-PROT database: [Q92830]
  • Domain organization of [KAT2A_HUMAN] by SWISSPFAM
  • Other resources with information on 1Z4R
  • Community annotation for 1Z4R at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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