1Z68 Lyase date Mar 21, 2005
title Crystal Structure Of Human Fibroblast Activation Protein Alp
authors K.Aertgeerts, I.Levin, L.Shi, G.S.Prasad, Y.Zhang, M.L.Kraus, S.Sa G.P.Snell, V.Sridhar, R.Wijnands, M.G.Tennant
compound source
Molecule: Fibroblast Activation Protein, Alpha Subunit
Chain: A, B
Ec: 3.4.21.-
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Sf9 Cells
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pfastbachtb
symmetry Space Group: P 21 21 21
R_factor 0.223 R_Free 0.283
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.295 152.580 214.855 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand NAG enzyme Hydrolase E.C.3.4.21 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • endopeptidase activity


    • Primary referenceStructural and Kinetic Analysis of the Substrate Specificity of Human Fibroblast Activation Protein {alpha}., Aertgeerts K, Levin I, Shi L, Snell GP, Jennings A, Prasad GS, Zhang Y, Kraus ML, Salakian S, Sridhar V, Wijnands R, Tennant MG, J Biol Chem 2005 May 20;280(20):19441-4. Epub 2005 Apr 4. PMID:15809306
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (254 Kb) [Save to disk]
  • Biological Unit Coordinates (1z68.pdb1.gz) 247 Kb
  • LPC: Ligand-Protein Contacts for 1Z68
  • CSU: Contacts of Structural Units for 1Z68
  • Likely Quarternary Molecular Structure file(s) for 1Z68
  • Structure Factors (576 Kb)
  • Retrieve 1Z68 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Z68 from S2C, [Save to disk]
  • Re-refined 1z68 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1Z68 in 3D
  • Proteopedia, because life has more than 2D.
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    • Visual 3D analysis of 1Z68
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1Z68, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1z68] [1z68_A] [1z68_B]
  • SWISS-PROT database: [Q12884]
  • Domain organization of [SEPR_HUMAN] by SWISSPFAM
    • Other resources with information on 1Z68
  • Community annotation for 1Z68 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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