1Z6X Transport Protein date Mar 23, 2005
title Structure Of Human Adp-Ribosylation Factor 4
authors J.Choe, A.Atanassova, C.Arrowsmith, A.Edwards, M.Sundstrom, A.Boc H.Park, Structural Genomics Consortium (Sgc)
compound source
Molecule: Adp-Ribosylation Factor 4
Chain: A, B
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Arf4
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28
symmetry Space Group: P 41 21 2
R_factor 0.222 R_Free 0.273
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.770 64.770 155.559 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand GDP, MG enzyme
related structures by homologous chain: 1HFV, 1RE0
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk]
  • Biological Unit Coordinates (1z6x.pdb1.gz) 30 Kb
  • Biological Unit Coordinates (1z6x.pdb2.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 1Z6X
  • CSU: Contacts of Structural Units for 1Z6X
  • Likely Quarternary Molecular Structure file(s) for 1Z6X
  • Structure Factors (68 Kb)
  • Retrieve 1Z6X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Z6X from S2C, [Save to disk]
  • Re-refined 1z6x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1Z6X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1Z6X
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1Z6X, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1z6x_B] [1z6x_A] [1z6x]
  • SWISS-PROT database: [P18085]
  • Domain organization of [ARF4_HUMAN] by SWISSPFAM
  • Domain found in 1Z6X: [ARF ] by SMART
    • Other resources with information on 1Z6X
  • Community annotation for 1Z6X at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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