1Z8R Hydrolase date Mar 31, 2005
title 2a Cysteine Proteinase From Human Coxsackievirus B4 (Strain Benschoten New York 51)
authors N.J.Baxter, A.Roetzer, H.D.Liebig, S.E.Sedelnikova, A.M.Hounslow J.P.Waltho
compound source
Molecule: Coxsackievirus B4 Polyprotein
Chain: A
Fragment: Picornain 2a
Ec: 3.4.22.29
Engineered: Yes
Mutation: Yes
 Organism_scientific: Human Coxsackievirus B4
Organism_taxid: 12073
Gene: Picornain 2a
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plyse
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet3d
methodSolution NMR
ligand ZN enzyme Hydrolase E.C.3.4.22.29 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure and dynamics of coxsackievirus B4 2A proteinase, an enyzme involved in the etiology of heart disease., Baxter NJ, Roetzer A, Liebig HD, Sedelnikova SE, Hounslow AM, Skern T, Waltho JP, J Virol. 2006 Feb;80(3):1451-62. PMID:16415022
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (642 Kb) [Save to disk]
  • Biological Unit Coordinates (1z8r.pdb1.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 1Z8R
  • CSU: Contacts of Structural Units for 1Z8R
  • Original NMR restraints for 1Z8R from PDB
  • Retrieve 1Z8R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Z8R from S2C, [Save to disk]
    • View 1Z8R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1Z8R
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1Z8R, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1z8r] [1z8r_A]
  • SWISS-PROT database: [P08292]
  • Domain organization of [POLG_CXB4J] by SWISSPFAM
    • Other resources with information on 1Z8R
  • Community annotation for 1Z8R at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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