1Z8U Electron Transport date Mar 31, 2005
title Crystal Structure Of Oxidized Alpha Hemoglobin Bound To Ahsp
authors L.Feng, S.Zhou, L.Gu, D.A.Gell, J.P.Mackay, M.J.Weiss, A.J.Gow, Y.S
compound source
Molecule: Alpha-Hemoglobin Stabilizing Protein
Chain: A, C
Synonym: Erythroid Associated Factor, Erythroid Differentia Related Factor, Ahsp;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ahsp, Edrf, Eraf
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Hemoglobin Alpha Chain
Chain: B, D
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hba1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.222 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.808 113.747 80.098 90.00 94.66 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand HEM enzyme
related structures by homologous chain: 1Y01, 1YFF, 1YIE
Gene
Ontology
ChainFunctionProcessComponent
A, C


D, B
  • peroxidase activity


  • Primary referenceStructure of oxidized alpha-haemoglobin bound to AHSP reveals a protective mechanism for haem., Feng L, Zhou S, Gu L, Gell DA, Mackay JP, Weiss MJ, Gow AJ, Shi Y, Nature 2005 Jun 2;435(7042):697-701. PMID:15931225
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (1z8u.pdb1.gz) 40 Kb
  • Biological Unit Coordinates (1z8u.pdb2.gz) 42 Kb
  • Biological Unit Coordinates (1z8u.pdb3.gz) 80 Kb
  • LPC: Ligand-Protein Contacts for 1Z8U
  • CSU: Contacts of Structural Units for 1Z8U
  • Likely Quarternary Molecular Structure file(s) for 1Z8U
  • Retrieve 1Z8U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Z8U from S2C, [Save to disk]
  • View 1Z8U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1Z8U
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1Z8U, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1z8u] [1z8u_B] [1z8u_A] [1z8u_D] [1z8u_C]
  • SWISS-PROT database: [Q9NZD4] [P69905]
  • Belongs to the pore-forming globin (globin) family according to TCDB.
  • Domain organization of [AHSP_HUMAN] [HBA_HUMAN] by SWISSPFAM
  • Other resources with information on 1Z8U
  • Community annotation for 1Z8U at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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