1ZC0 Hydrolase date Apr 09, 2005
title Crystal Structure Of Human Hematopoietic Tyrosine Phosphatas Catalytic Domain
authors R.Page, T.Mustelin
compound source
Molecule: Tyrosine-Protein Phosphatase, Non-Receptor Type 7
Chain: A
Fragment: Catalytic Phosphatase Domain
Synonym: Protein-Tyrosine Phosphatase Lc-Ptp, Hematopoietic Tyrosine Phosphatase, Heptp;
Ec: 3.1.3.48
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ptpn7
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61
R_factor 0.161 R_Free 0.186
crystal
cell
length a length b length c angle alpha angle beta angle gamma
127.101 127.101 59.863 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.85 Å
ligand PO4 enzyme Hydrolase E.C.3.1.3.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the hematopoietic tyrosine phosphatase (HePTP) catalytic domain: structure of a KIM phosphatase with phosphate bound at the active site., Mustelin T, Tautz L, Page R, J Mol Biol 2005 Nov 18;354(1):150-63. Epub 2005 Oct 3. PMID:16226275
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (1zc0.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 1ZC0
  • CSU: Contacts of Structural Units for 1ZC0
  • Likely Quarternary Molecular Structure file(s) for 1ZC0
  • Structure Factors (341 Kb)
  • Retrieve 1ZC0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZC0 from S2C, [Save to disk]
  • Re-refined 1zc0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ZC0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZC0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1ZC0, from MSDmotif at EBI
  • Fold representative 1zc0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zc0_A] [1zc0]
  • SWISS-PROT database: [P35236]
  • Domain organization of [PTN7_HUMAN] by SWISSPFAM
  • Domain found in 1ZC0: [PTPc ] by SMART
  • Other resources with information on 1ZC0
  • Community annotation for 1ZC0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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