1ZCE Structural Genomics, Unknown Function date Apr 11, 2005
title X-Ray Crystal Structure Of Protein Atu2648 From Agrobacteriu Tumefaciens. Northeast Structural Genomics Consortium Targe
authors F.Forouhar, Y.Chen, K.Conover, T.B.Acton, G.T.Montelione, J.F.Hun Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Hypothetical Protein Atu2648
Chain: A
Engineered: Yes
 Organism_scientific: Agrobacterium Tumefaciens Str. C58
Organism_taxid: 176299
Strain: C58 Atcc 33970
Gene: Locus_tag="Atu2648"
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+Magic
Expression_system_vector_type: Pet21
Expression_system_plasmid: Bl21
symmetry Space Group: P 1 21 1
R_factor 0.195 R_Free 0.211
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.642 42.791 43.684 90.00 113.67 90.00
method X-Ray Diffractionresolution 1.30 Å
ligand MSE enzyme
note 1ZCE is a representative structure
Gene LOCUS
Primary referenceStructural genomics reveals EVE as a new ASCH/PUA-related domain., Bertonati C, Punta M, Fischer M, Yachdav G, Forouhar F, Zhou W, Kuzin AP, Seetharaman J, Abashidze M, Ramelot TA, Kennedy MA, Cort JR, Belachew A, Hunt JF, Tong L, Montelione GT, Rost B, Proteins. 2009 May 15;75(3):760-73. PMID:19191354
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (1zce.pdb1.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 1ZCE
  • CSU: Contacts of Structural Units for 1ZCE
  • Likely Quarternary Molecular Structure file(s) for 1ZCE
  • Structure Factors (1021 Kb)
  • Retrieve 1ZCE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZCE from S2C, [Save to disk]
  • Re-refined 1zce structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1ZCE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ZCE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZCE, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zce_A] [1zce]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1ZCE
  • Community annotation for 1ZCE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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