1ZE7 Metal Binding Protein date Apr 18, 2005
title Zinc-Binding Domain Of Alzheimer'S Disease Amyloid Beta-Pept Water Solution At Ph 6.5
authors S.Zirah, S.A.Kozin, A.K.Mazur, A.Blond, M.Cheminant, I.Segalas-Mi P.Debey, S.Rebuffat
compound source
Molecule: 16-Mer From Alzheimer'S Disease Amyloid Protein
Chain: A
Synonym: Alzheimer'S Disease Amyloid A4 Protein, Amyloid Be Protein;
Engineered: Yes
Synthetic: Yes
Other_details: This Sequence Occurs Naturally In Humans.
methodSolution NMR
ligand ACE, NH2 enzyme
Primary referenceStructural changes of region 1-16 of the Alzheimer disease amyloid beta-peptide upon zinc binding and in vitro aging., Zirah S, Kozin SA, Mazur AK, Blond A, Cheminant M, Segalas-Milazzo I, Debey P, Rebuffat S, J Biol Chem. 2006 Jan 27;281(4):2151-61. Epub 2005 Nov 21. PMID:16301322
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (1ze7.pdb1.gz) 5 Kb
  • LPC: Ligand-Protein Contacts for 1ZE7
  • CSU: Contacts of Structural Units for 1ZE7
  • Original NMR restraints for 1ZE7 from PDB
  • Retrieve 1ZE7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZE7 from S2C, [Save to disk]
  • View 1ZE7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZE7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1ZE7, from MSDmotif at EBI
  • Fold representative 1ze7 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ze7] [1ze7_A]
  • SWISS-PROT database: [P05067]
  • Belongs to the amyloid -protein peptide (app) family according to TCDB.
  • Domain organization of [A4_HUMAN] by SWISSPFAM
  • Other resources with information on 1ZE7
  • Community annotation for 1ZE7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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