1ZFU Antimicrobial Protein date Apr 20, 2005
title Plectasin:A Peptide Antibiotic With Therapeutic Potential Fr Saprophytic Fungus
authors P.H.Mygind, R.L.Fischer, K.Schnorr, M.T.Hansen, C.P.Sonksen, S.Lu D.Raventos, S.Buskov, B.Christensen, L.De Maria, O.Taboureau, D. S.G.Elvig-Jorgensen, M.V.Sorensen, B.E.Christensen, S.Kjaerulf N.Frimodt-Moller, R.I.Lehrer, M.Zasloff, H.H.Kristensen
compound source
Molecule: Plectasin
Chain: A
Fragment: Residues 56-95
Engineered: Yes
 Organism_scientific: Pseudoplectania Nigrella
Organism_taxid: 96584
Expression_system: Aspergillus Oryzae
Expression_system_taxid: 5062
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePlectasin is a peptide antibiotic with therapeutic potential from a saprophytic fungus., Mygind PH, Fischer RL, Schnorr KM, Hansen MT, Sonksen CP, Ludvigsen S, Raventos D, Buskov S, Christensen B, De Maria L, Taboureau O, Yaver D, Elvig-Jorgensen SG, Sorensen MV, Christensen BE, Kjaerulff S, Frimodt-Moller N, Lehrer RI, Zasloff M, Kristensen HH, Nature. 2005 Oct 13;437(7061):975-80. PMID:16222292
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk]
  • Biological Unit Coordinates (1zfu.pdb1.gz) 10 Kb
  • CSU: Contacts of Structural Units for 1ZFU
  • Original NMR restraints for 1ZFU from PDB
  • Retrieve 1ZFU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZFU from S2C, [Save to disk]
    • View 1ZFU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ZFU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZFU, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zfu_A] [1zfu]
  • SWISS-PROT database: [Q53I06]
  • Belongs to the insect/fungal defensin (insect/fungal defensin) family according to TCDB.
  • Domain organization of [PLECT_PSENR] by SWISSPFAM
    • Other resources with information on 1ZFU
  • Community annotation for 1ZFU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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