1ZGU	Ligase Signaling Protein	date	Apr 22, 2005
title	Solution Structure Of The Human Mms2-Ubiquitin Complex
authors	M.J.Lewis, L.F.Saltibus, D.D.Hau, W.Xiao, L.Spyracopoulos
compound		source
Molecule: Ubiquitin-Conjugating Enzyme E2 Variant 2 Chain: A Synonym: Mms2, Enterocyte Differentiation Associated Factor Enterocyte Differentiation Promoting Factor, Edpf-1, Vitami Inducible Protein, Ddvit 1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ube2v2, Mms2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-6p
Molecule: Ubiquitin Chain: B Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet3a
method	Solution NMR
Gene Ontology	Chain Function Process Component A
Primary reference	Structural Basis for Non-Covalent Interaction Between Ubiquitin and the Ubiquitin Conjugating Enzyme Variant Human MMS2., Lewis MJ, Saltibus LF, Hau DD, Xiao W, Spyracopoulos L, J Biomol NMR. 2006 Feb;34(2):89-100. PMID:16518696

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (632 Kb) [Save to disk] Biological Unit Coordinates (1zgu.pdb1.gz) 62 Kb CSU: Contacts of Structural Units for 1ZGU Original NMR restraints for 1ZGU from PDB Retrieve 1ZGU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1ZGU from S2C, [Save to disk]

View 1ZGU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1ZGU

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1ZGU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1zgu_B] [1zgu] [1zgu_A] SWISS-PROT database: [Q15819] [P62988] Domain organization of [UB2V2_HUMAN] [UBIQ_HUMAN] by SWISSPFAM Domains found in 1ZGU: [UBCc] [UBQ ] by SMART

Other resources with information on 1ZGU

Community annotation for 1ZGU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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