1ZPV Structural Genomics, Unknown Function date May 17, 2005
title Act Domain Protein From Streptococcus Pneumoniae
authors J.Osipiuk, C.Hatzos, J.Abdullah, F.Collart, A.Joachimiak, Midwest For Structural Genomics (Mcsg)
compound source
Molecule: Act Domain Protein
Chain: A, B, C
Engineered: Yes
 Organism_scientific: Streptococcus Pneumoniae
Organism_taxid: 170187
Strain: Tigr4
Gene: Sp0238
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: C 1 2 1
R_factor 0.189 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
109.253 62.024 38.006 90.00 95.08 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand K, MSE enzyme
note 1ZPV is a representative structure
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (1zpv.pdb1.gz) 45 Kb
  • Biological Unit Coordinates (1zpv.pdb2.gz) 31 Kb
  • Biological Unit Coordinates (1zpv.pdb3.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 1ZPV
  • CSU: Contacts of Structural Units for 1ZPV
  • Likely Quarternary Molecular Structure file(s) for 1ZPV
  • Structure Factors (225 Kb)
  • Retrieve 1ZPV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZPV from S2C, [Save to disk]
  • Re-refined 1zpv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1ZPV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ZPV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZPV, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zpv_B] [1zpv_C] [1zpv] [1zpv_A]
  • SWISS-PROT database: [P67382]
  • Domain organization of [Y238_STRPN] by SWISSPFAM
    • Other resources with information on 1ZPV
  • Community annotation for 1ZPV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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