1ZT3 Peptide Binding Protein date May 26, 2005
title C-Terminal Domain Of Insulin-Like Growth Factor Binding Prot Isolated From Human Amniotic Fluid
authors A.Sala, S.Capaldi, M.Campagnoli, B.Faggion, S.Labo, M.Perduca, A.R M.E.Carrizo, M.Valli, L.Visai, L.Minchiotti, M.Galliano, H.L.Mon
compound source
Molecule: Insulin-Like Growth Factor Binding Protein 1
Chain: A
Fragment: C-Terminal Domain
Synonym: Igfbp-1, Ibp- 1, Igf-Binding Protein 1, Placental 12, Pp12
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Amniotic Fluid
symmetry Space Group: P 21 21 2
R_factor 0.221 R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
38.540 60.390 31.240 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand DIO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure and properties of the C-terminal domain of insulin-like growth factor binding protein-1 isolated from human amniotic fluid., Sala A, Capaldi S, Campagnoli M, Faggion B, Labo S, Perduca M, Romano A, Carrizo ME, Valli M, Visai L, Minchiotti L, Galliano M, Monaco HL, J Biol Chem 2005 Jun 22;. PMID:15972819
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (18 Kb) [Save to disk]
  • Biological Unit Coordinates (1zt3.pdb1.gz) 15 Kb
  • LPC: Ligand-Protein Contacts for 1ZT3
  • CSU: Contacts of Structural Units for 1ZT3
  • Likely Quarternary Molecular Structure file(s) for 1ZT3
  • Structure Factors (59 Kb)
  • Retrieve 1ZT3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZT3 from S2C, [Save to disk]
  • Re-refined 1zt3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1ZT3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ZT3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZT3, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zt3] [1zt3_A]
  • SWISS-PROT database: [P08833]
  • Domain organization of [IBP1_HUMAN] by SWISSPFAM
  • Domain found in 1ZT3: [TY ] by SMART
    • Other resources with information on 1ZT3
  • Community annotation for 1ZT3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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