1ZUZ Metal Binding Protein Transferase date Jun 01, 2005
title Calmodulin In Complex With A Mutant Peptide From Human Drp-1
authors P.Kursula, J.Vahokoski, M.Wilmanns
compound source
Molecule: Calmodulin
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet

Molecule: Drp-1 Kinase
Chain: B
Engineered: Yes
Mutation: Yes

Synthetic: Yes
Other_details: Synthetic Peptide, Mutation S308d, The Seque
The Peptide: Calmodulin-Binding Domain Is Naturally Found I Sapiens.
symmetry Space Group: C 1 2 1
R_factor 0.191 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.520 34.030 73.850 90.00 109.58 90.00
method X-Ray Diffractionresolution 1.91 Å
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (1zuz.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (1zuz.pdb2.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 1ZUZ
  • CSU: Contacts of Structural Units for 1ZUZ
  • Likely Quarternary Molecular Structure file(s) for 1ZUZ
  • Structure Factors (90 Kb)
  • Retrieve 1ZUZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZUZ from S2C, [Save to disk]
  • Re-refined 1zuz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ZUZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZUZ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1ZUZ, from MSDmotif at EBI
  • Fold representative 1zuz from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zuz_A] [1zuz] [1zuz_B]
  • SWISS-PROT database: [P62158] [Q1RMF4]
  • Belongs to the calmodulin calcium binding protein (calmodulin) family according to TCDB.
  • Domain organization of [CALM_HUMAN] [Q1RMF4_HUMAN] by SWISSPFAM
  • Domain found in 1ZUZ: [EFh ] by SMART
  • Other resources with information on 1ZUZ
  • Community annotation for 1ZUZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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