1B0U ATP-BINDING SUBUNIT OF THE HISTIDINE PERMEASE FROM SALMONELLA TYPHIMURIUM date
authors Hung, L.W., Wang, I.X., Nikaido, K., Liu, P.Q., Ames, G.F.L., Kim, S.H.
compound source
symmetry
R_factor
R_Free 0.2110000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
ligand ATP, CL enzyme
note 1B0U is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the ATP-binding subunit of an ABC transporter., Hung LW, Wang IX, Nikaido K, Liu PQ, Ames GF, Kim SH, Nature 1998 Dec 17;396(6712):703-7. PMID:9872322
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (1b0u.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 1B0U
  • CSU: Contacts of Structural Units for 1B0U
  • Likely Quarternary Molecular Structure file(s) for 1B0U
  • Retrieve 1B0U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1B0U from S2C, [Save to disk]
  • View 1B0U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1B0U
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1B0U from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1B0U, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1b0ua_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1b0u from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1b0u_A] [1b0u]
  • SWISS-PROT database: [P02915]
  • Belongs to the atp-binding cassette (abc) superfamily according to TCDB.
  • Domain organization of [HISP_SALTY] by SWISSPFAM
  • Domain found in 1B0U: [AAA ] by SMART
  • Other resources with information on 1B0U
  • Community annotation for 1B0U at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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