1BFW RETRO-INVERSO ANALOGUE OF THE G-H LOOP OF VP1 IN FOOT-AND-MOUTH-DISEASE (FMD) VIRUS, NMR, 10 STRUCTURES date
authors Petit, M.C., Benkirane, N., Guichard, G., Du, A.Phan.Chan., Cung, M.T., Briand, J.P., Muller, S.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 10 Modelsresolution
ligand DAL, DAR, DAS, DGN, DLE, DPN, DPR, DSN, DVA, LML, NH2 enzyme
Primary referenceSolution structure of a retro-inverso peptide analogue mimicking the foot-and-mouth disease virus major antigenic site. Structural basis for its antigenic cross-reactivity with the parent peptide., Petit MC, Benkirane N, Guichard G, Du AP, Marraud M, Cung MT, Briand JP, Muller S, J Biol Chem 1999 Feb 5;274(6):3686-92. PMID:9920919
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (1bfw.pdb1.gz) 5 Kb
  • LPC: Ligand-Protein Contacts for 1BFW
  • CSU: Contacts of Structural Units for 1BFW
  • Original NMR restraints for 1BFW from PDB
  • Retrieve 1BFW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BFW from S2C, [Save to disk]
    • View 1BFW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1BFW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BFW, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bfw_A] [1bfw]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1BFW
  • Community annotation for 1BFW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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