1BTE Transferase date Sep 01, 1998
title Crystal Structure Of The Extracellular Domain Of The Type II Receptor
authors J.Greenwald, W.Fischer, W.Vale, S.Choe
compound source
Molecule: Protein (Activin Receptor Type II)
Chain: A, B
Fragment: Ligand-Binding Domain
Ec: 2.7.1.-
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
Expression_system_strain: Smd1168
Expression_system_plasmid: Ppic9k
symmetry Space Group: P 3
R_factor 0.181 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.630 71.630 37.380 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.50 Å
ligand NAG enzyme Transferase E.C.2.7.1 BRENDA
note 1BTE is a representative structure
related structures by homologous chain: 1S4Y
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThree-finger toxin fold for the extracellular ligand-binding domain of the type II activin receptor serine kinase., Greenwald J, Fischer WH, Vale WW, Choe S, Nat Struct Biol 1999 Jan;6(1):18-22. PMID:9886286
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (1bte.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 1BTE
  • CSU: Contacts of Structural Units for 1BTE
  • Likely Quarternary Molecular Structure file(s) for 1BTE
  • Retrieve 1BTE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BTE from S2C, [Save to disk]
  • View 1BTE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BTE
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1BTE 1BTEA 1BTEB from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1BTE, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1btea_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1bteb_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1bte from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bte] [1bte_B] [1bte_A]
  • SWISS-PROT database: [P27038]
  • Domain organization of [AVR2A_MOUSE] by SWISSPFAM
  • Other resources with information on 1BTE
  • Community annotation for 1BTE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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