1CJT Lyase Lyase Signaling Protein date Apr 16, 1999
title Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Cyclase: Complex With Beta-L-2',3'-Dideoxyatp, Mn, And Mg
authors J.J.G.Tesmer, S.R.Sprang
compound source
Molecule: Adenylate Cyclase, Type V
Chain: A
Fragment: C1a Domain Of Adenylyl Cyclase
Synonym: Protein Vc1
Ec: 4.6.1.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Canis Lupus Familiaris
Organism_common: Dog
Organism_taxid: 9615
Strain: Familiaris
Organ: Cardiac Muscle
Cellular_location: Cytoplasm
Gene: Adenylyl Cyclase Type V
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21
Expression_system_variant: De3
Expression_system_vector_type: Multi-Copy Plasmid
Expression_system_plasmid: Pqe60-H6-Vc1(580)

Molecule: Adenylate Cyclase, Type II
Chain: B
Fragment: C2a Domain Of Adenylyl Cyclase
Synonym: Protein Iic2, Atp Pyrophosphate-Lyase, Adenylyl Cy
Ec: 4.6.1.1
Engineered: Yes

Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Organ: Brain
Cellular_location: Cytoplasm
Gene: Adenylyl Cyclase Type II
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21
Expression_system_variant: De3
Expression_system_vector_type: Multi-Copy Plasmid
Expression_system_plasmid: Pqe60-Argc-Iic2

Molecule: Guanine Nucleotide-Binding Protein G(S)
Chain: C
Fragment: Trypsinized Fragment
Synonym: Alpha Subunit Of Adenylate Cyclase-Stimulating G A Protein, Gs-Alpha, Protein Gsa;
Engineered: Yes
Mutation: Yes

Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Cellular_location: Cytoplasm
Gene: Gnas
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21
Expression_system_variant: De3
Expression_system_vector_type: Multi-Copy Plasmid
Expression_system_plasmid: Pqe60-Gsalpha-H
Expression_system_gene: Gnas
symmetry Space Group: P 21 21 2
R_factor 0.206 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
118.200 134.200 71.300 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand CL, DAD, FOK, GSP, MES, MG, MN enzyme Lyase E.C.4.6.1.1 BRENDA
related structures by homologous chain: 1AB8, 1CJU, 1CS4
Gene
Ontology
ChainFunctionProcessComponent
A, B


C


Primary referenceTwo-metal-Ion catalysis in adenylyl cyclase., Tesmer JJ, Sunahara RK, Johnson RA, Gosselin G, Gilman AG, Sprang SR, Science 1999 Jul 30;285(5428):756-60. PMID:10427002
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk]
  • Biological Unit Coordinates (1cjt.pdb1.gz) 118 Kb
  • LPC: Ligand-Protein Contacts for 1CJT
  • CSU: Contacts of Structural Units for 1CJT
  • Likely Quarternary Molecular Structure file(s) for 1CJT
  • Structure Factors (240 Kb)
  • Retrieve 1CJT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CJT from S2C, [Save to disk]
  • Re-refined 1cjt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1CJT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CJT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CJT, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cjta_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1cjtb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1cjtc2, region C:39-65,C:202-388 [Jmol] [rasmolscript] [script source]
        - Domain d1cjtc1, region C:86-201 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cjt_C] [1cjt_B] [1cjt] [1cjt_A]
  • SWISS-PROT database: [P26769] [P30803] [P04896]
  • Domain organization of [ADCY2_RAT] [ADCY5_CANFA] [GNAS2_BOVIN] by SWISSPFAM
  • Domains found in 1CJT: [CYCc] [G_alpha ] by SMART
  • Other resources with information on 1CJT
  • Community annotation for 1CJT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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