1DQR CRYSTAL STRUCTURE OF RABBIT PHOSPHOGLUCOSE ISOMERASE, A GLYCOLYTIC ENZYME THAT MOONLIGHTS AS NEUROLEUKIN, AUTOCRINE MOTILITY FACTOR, AND DIFFERENTIATION MEDIATOR date
authors Bahnson, B.J., Jeffery, C.J., Ringe, D., Petsko, G.A.
compound source
symmetry
R_factor
R_Free 0.2650000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand 6PG enzyme
related structures by homologous chain: 1N8T, 1NUH
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • cytokine activity


    • Primary referenceCrystal structure of rabbit phosphoglucose isomerase, a glycolytic enzyme that moonlights as neuroleukin, autocrine motility factor, and differentiation mediator., Jeffery CJ, Bahnson BJ, Chien W, Ringe D, Petsko GA, Biochemistry 2000 Feb 8;39(5):955-64. PMID:10653639
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (191 Kb) [Save to disk]
  • Biological Unit Coordinates (1dqr.pdb1.gz) 186 Kb
  • LPC: Ligand-Protein Contacts for 1DQR
  • CSU: Contacts of Structural Units for 1DQR
  • Likely Quarternary Molecular Structure file(s) for 1DQR
  • Structure Factors (350 Kb)
  • Retrieve 1DQR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DQR from S2C, [Save to disk]
  • Re-refined 1dqr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1DQR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1DQR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1DQR, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1dqra_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1dqrb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dqr_B] [1dqr] [1dqr_A]
  • SWISS-PROT database: [Q9N1E2]
  • Domain organization of [G6PI_RABIT] by SWISSPFAM
    • Other resources with information on 1DQR
  • Community annotation for 1DQR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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