1FVV	Transferase, Cell Cycle	date	Sep 20, 2000
title	The Structure Of Cdk2cyclin A In Complex With An Oxindole I
authors	S.T.Davis, B.G.Benson, H.N.Bramson, D.E.Chapman, S.H.Dickerson, K D.J.Eberwein, M.Edelstein, S.V.Frye, R.T.Gampe Jr., R.J.Griffin P.A.Harris, A.M.Hassell, W.D.Holmes, R.N.Hunter, V.B.Knick, K.La B.Lovejoy, M.J.Luzzio, D.Murray, P.Parker, W.J.Rocque, L.Shewchu J.M.Veal, D.H.Walker, L.K.Kuyper
compound		source
Molecule: Cyclin-Dependent Kinase 2 Chain: A, C Synonym: Cdk2, P33 Protein Kinase Ec: 2.7.1.37 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pfastbac1 Or Pachlt-A
Molecule: Cyclin A Chain: B, D Synonym: Cyclin A2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 62 2 2	R_factor 0.260 R_Free 0.260
crystal cell	length a length b length c angle alpha angle beta angle gamma 184.952 184.952 212.832 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	107	enzyme	Transferase E.C.2.7.1.37 BRENDA
related structures	by homologous chain: 1H28, 1OL1
Gene Ontology	Chain Function Process Component A, C
Primary reference	Prevention of chemotherapy-induced alopecia in rats by CDK inhibitors., Davis ST, Benson BG, Bramson HN, Chapman DE, Dickerson SH, Dold KM, Eberwein DJ, Edelstein M, Frye SV, Gampe Jr RT, Griffin RJ, Harris PA, Hassell AM, Holmes WD, Hunter RN, Knick VB, Lackey K, Lovejoy B, Luzzio MJ, Murray D, Parker P, Rocque WJ, Shewchuk L, Veal JM, Walker DH, Kuyper LF, Science 2001 Jan 5;291(5501):134-7. PMID:11141566

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (187 Kb) [Save to disk] Biological Unit Coordinates (1fvv.pdb1.gz) 93 Kb Biological Unit Coordinates (1fvv.pdb2.gz) 93 Kb LPC: Ligand-Protein Contacts for 1FVV CSU: Contacts of Structural Units for 1FVV Likely Quarternary Molecular Structure file(s) for 1FVV Structure Factors (720 Kb) Retrieve 1FVV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1FVV from S2C, [Save to disk] Re-refined 1fvv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1FVV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1FVV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1FVV, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1fvva_, region A [Jmol] [rasmolscript] [script source]     - Domain d1fvvb1, region B:173-309 [Jmol] [rasmolscript] [script source]     - Domain d1fvvb2, region B:310-432 [Jmol] [rasmolscript] [script source]     - Domain d1fvvc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1fvvd1, region D:173-309 [Jmol] [rasmolscript] [script source]     - Domain d1fvvd2, region D:310-432 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1fvv] [1fvv_A] [1fvv_D] [1fvv_B] [1fvv_C] SWISS-PROT database: [P20248] [P24941] Domain organization of [CCNA2_HUMAN] [CDK2_HUMAN] by SWISSPFAM Domains found in 1FVV: [CYCLIN] [Cyclin_C] [S_TKc ] by SMART

Other resources with information on 1FVV

Community annotation for 1FVV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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