1HNV	Nucleotidyltransferase	date	Mar 30, 1995
title	Structure Of Hiv-1 Rt(Slash)Tibo R 86183 Complex Reveals Sim The Binding Of Diverse Nonnucleoside Inhibitors
authors	K.Das, J.Ding, E.Arnold
compound		source
Molecule: Hiv-1 Reverse Transcriptase (Subunit P66) Chain: A Ec: 2.7.7.49 Engineered: Yes		Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Hiv-1 Reverse Transcriptase (Subunit P51) Chain: B Ec: 2.7.7.49 Engineered: Yes		Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.249 R_Free 0.356
crystal cell	length a length b length c angle alpha angle beta angle gamma 227.200 70.200 105.700 90.00 105.60 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	TBO BindingDB	enzyme	Transferase E.C.2.7.7.49 BRENDA
related structures	by homologous chain: 1N6Q, 1T05
Gene Ontology	Chain Function Process Component A B
Primary reference	Structure of HIV-1 RT/TIBO R 86183 complex reveals similarity in the binding of diverse nonnucleoside inhibitors., Ding J, Das K, Moereels H, Koymans L, Andries K, Janssen PA, Hughes SH, Arnold E, Nat Struct Biol 1995 May;2(5):407-15. PMID:7545077

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (162 Kb) [Save to disk] Biological Unit Coordinates (1hnv.pdb1.gz) 156 Kb LPC: Ligand-Protein Contacts for 1HNV CSU: Contacts of Structural Units for 1HNV Likely Quarternary Molecular Structure file(s) for 1HNV Structure Factors (205 Kb) Retrieve 1HNV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1HNV from S2C, [Save to disk] Re-refined 1hnv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1HNV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1HNV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1HNV, from MSDmotif at EBI Genome occurence of 1HNV's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1hnva2, region A:1-429 [Jmol] [rasmolscript] [script source]     - Domain d1hnva1, region A:430-558 [Jmol] [rasmolscript] [script source]     - Domain d1hnvb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1hnv_B] [1hnv_A] [1hnv] SWISS-PROT database: [P03366] Domain organization of [POL_HV1B1] by SWISSPFAM

Other resources with information on 1HNV

Community annotation for 1HNV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 1HNV from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

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