1HYB	Transferase	date	Jan 18, 2001
title	Crystal Structure Of An Active Site Mutant Of Methanobacteri Thermoautotrophicum Nicotinamide Mononucleotide Adenylyltra
authors	V.Saridakis, D.Christendat, M.S.Kimber, A.M.Edwards, E.F.Pai
compound		source
Molecule: Nicotinamide Mononucleotide Adenylyltransferase Chain: A Ec: 2.7.7.1 Engineered: Yes Mutation: Yes		Organism_scientific: Methanothermobacter Thermautotrophicus Organism_taxid: 145262 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
symmetry	Space Group: P 63 2 2	R_factor 0.237 R_Free 0.286
crystal cell	length a length b length c angle alpha angle beta angle gamma 89.778 89.778 108.946 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	NMN, SO4	enzyme	Transferase E.C.2.7.7.1 BRENDA
related structures	by homologous chain: 1M8F, 1M8G
Gene Ontology	Chain Function Process Component A
Primary reference	Insights into ligand binding and catalysis of a central step in NAD+ synthesis: structures of Methanobacterium thermoautotrophicum NMN adenylyltransferase complexes., Saridakis V, Christendat D, Kimber MS, Dharamsi A, Edwards AM, Pai EF, J Biol Chem 2001 Mar 9;276(10):7225-32. PMID:11063748

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk] Biological Unit Coordinates (1hyb.pdb1.gz) 160 Kb LPC: Ligand-Protein Contacts for 1HYB CSU: Contacts of Structural Units for 1HYB Likely Quarternary Molecular Structure file(s) for 1HYB Retrieve 1HYB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1HYB from S2C, [Save to disk]

View 1HYB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1HYB

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1HYB, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1hyba_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1hyb] [1hyb_A] SWISS-PROT database: [O26253] Domain organization of [NADM_METTH] by SWISSPFAM

Other resources with information on 1HYB

Community annotation for 1HYB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---