1LIE Lipid Binding Protein date Dec 21, 1993
title X-Ray Crystallographic Structures Of Adipocyte Lipid Binding Complexed With Palmitate And Hexadecanesulfonic Acid. Prope Cavity Binding Sites
authors J.M.Lalonde, D.A.Bernlohr, L.J.Banaszak
compound source
Molecule: Adipocyte Lipid-Binding Protein
Chain: A
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
symmetry Space Group: C 1 2 1
R_factor 0.198 R_Free 0.239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
119.540 37.860 28.570 90.00 92.66 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand OCS, PLM, PPI BindingDB enzyme
related structures by homologous chain: 1LIB, 1LIC
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray crystallographic structures of adipocyte lipid-binding protein complexed with palmitate and hexadecanesulfonic acid. Properties of cavity binding sites., LaLonde JM, Bernlohr DA, Banaszak LJ, Biochemistry 1994 Apr 26;33(16):4885-95. PMID:8161548
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (27 Kb) [Save to disk]
  • Biological Unit Coordinates (1lie.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 1LIE
  • CSU: Contacts of Structural Units for 1LIE
  • Likely Quarternary Molecular Structure file(s) for 1LIE
  • Retrieve 1LIE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LIE from S2C, [Save to disk]
  • View 1LIE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1LIE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LIE, from MSDmotif at EBI
  • Genome occurence of 1LIE's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lie__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lie_A] [1lie]
  • SWISS-PROT database: [P04117]
  • Domain organization of [FABP4_MOUSE] by SWISSPFAM
  • Other resources with information on 1LIE
  • Community annotation for 1LIE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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