294D Dna date Oct 30, 1996
title Intercalated Cytosine Motif And Novel Adenine Clusters In Th Structure Of Tetrahymena Telomere
authors L.Cai, L.Chen, S.Raghavan, R.Ratliff, R.Moyzis, A.Rich
compound source
Molecule: Dna (5'-D(Apapcpcpcpc)-3')
Chain: A, B, C, D, E, F, G, H
Engineered: Yes
 Synthetic: Yes
symmetry Space Group: P 2 21 21
R_factor 0.212 R_Free 0.295
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.930 52.330 76.940 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
Primary referenceIntercalated cytosine motif and novel adenine clusters in the crystal structure of the Tetrahymena telomere., Cai L, Chen L, Raghavan S, Ratliff R, Moyzis R, Rich A, Nucleic Acids Res 1998 Oct 15;26(20):4696-705. PMID:9753739
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk]
  • Biological Unit Coordinates (294d.pdb1.gz) 10 Kb
  • Biological Unit Coordinates (294d.pdb2.gz) 10 Kb
  • CSU: Contacts of Structural Units for 294D
  • Likely Quarternary Molecular Structure file(s) for 294D
  • Retrieve 294D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 294D from S2C, [Save to disk]
    • View 294D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 294D
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 294D, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [294d_E] [294d] [294d_C] [294d_H] [294d_A] [294d_D] [294d_F] [294d_B] [294d_G]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 294D
  • Community annotation for 294D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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