2A3I Transferase date Jun 24, 2005
title Structural And Biochemical Mechanisms For The Specificity Of Binding And Coactivator Assembly By Mineralocorticoid Recep
authors Y.Li, K.Suino, J.Daugherty, H.E.Xu
compound source
Molecule: Mineralocorticoid Receptor
Chain: A
Fragment: Mineralocoricoid Receptor
Synonym: Mr
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nr3c2, Mcr, Mlr
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet24a

Molecule: Nuclear Receptor Coactivator 1, Residues 1430-144
Chain: B
Synonym: Ncoa-1, Steroid Receptor Coactivator-1, Src-1, Rip Protein;
Ec: 2.3.1.48
Engineered: Yes

Synthetic: Yes
Other_details: This Sequence Occurs Naturally In Homo Sapie (Humans).
symmetry Space Group: P 21 21 21
R_factor 0.222 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.647 72.259 81.226 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand C0R enzyme Transferase E.C.2.3.1.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and biochemical mechanisms for the specificity of hormone binding and coactivator assembly by mineralocorticoid receptor., Li Y, Suino K, Daugherty J, Xu HE, Mol Cell 2005 Aug 5;19(3):367-80. PMID:16061183
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (2a3i.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 2A3I
  • CSU: Contacts of Structural Units for 2A3I
  • Likely Quarternary Molecular Structure file(s) for 2A3I
  • Structure Factors (159 Kb)
  • Retrieve 2A3I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A3I from S2C, [Save to disk]
  • Re-refined 2a3i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2A3I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2A3I
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2A3I, from MSDmotif at EBI
  • Fold representative 2a3i from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a3i_A] [2a3i] [2a3i_B]
  • SWISS-PROT database: [P08235] [Q15788]
  • Domain organization of [MCR_HUMAN] [NCOA1_HUMAN] by SWISSPFAM
  • Domain found in 2A3I: [HOLI ] by SMART
  • Other resources with information on 2A3I
  • Community annotation for 2A3I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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