2A4J Structural Protein date Jun 29, 2005
title Solution Structure Of The C-Terminal Domain (T94-Y172) Of Th Centrin 2 In Complex With A 17 Residues Peptide (P1-Xpc) Fr Xeroderma Pigmentosum Group C Protein
authors A.Yang, S.Miron, L.Mouawad, P.Duchambon, Y.Blouquit, C.T.Craescu
compound source
Molecule: Centrin 2
Chain: A
Fragment: C-Terminal Domain (Residues 94-172)
Synonym: Caltractin Isoform 1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cen2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet24a(+)

Molecule: 17-Mer Peptide P1-Xpc From Dna-Repair Protein Com Xp-C Cells;
Chain: B
Fragment: Residues 847-863
Synonym: Xeroderma Pigmentosum Group C Complementing Protei
Engineered: Yes

Synthetic: Yes
Other_details: This Sequens Occurs In Homo Sapiens
methodSolution NMR
note 2A4J supersedes 1T2G
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFlexibility and plasticity of human centrin 2 binding to the xeroderma pigmentosum group C protein (XPC) from nuclear excision repair., Yang A, Miron S, Mouawad L, Duchambon P, Blouquit Y, Craescu CT, Biochemistry. 2006 Mar 21;45(11):3653-63. PMID:16533048
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (541 Kb) [Save to disk]
  • Biological Unit Coordinates (2a4j.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 2A4J
  • Original NMR restraints for 2A4J from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 2A4J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A4J from S2C, [Save to disk]
  • View 2A4J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2A4J
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2A4J, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a4j] [2a4j_B] [2a4j_A]
  • SWISS-PROT database: [P41208] [Q01831]
  • Domain organization of [CETN2_HUMAN] [XPC_HUMAN] by SWISSPFAM
  • Domain found in 2A4J: [EFh ] by SMART
  • Other resources with information on 2A4J
  • Community annotation for 2A4J at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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