2A50 Luminescent Protein date Jun 30, 2005
title Fluorescent Protein Asfp595, Wt, Off-State
authors M.Andresen, M.C.Wahl, A.C.Stiel, F.Graeter, L.Schaefer, S.Trowitz G.Weber, C.Eggeling, H.Grubmueller, S.W.Hell, S.Jakobs
compound source
Molecule: Gfp-Like Non-Fluorescent Chromoprotein Fp595 Chai
Chain: A, C
Synonym: Asfp595
Engineered: Yes
Organism_scientific: Anemonia Sulcata
Organism_common: Snake-Locks Sea Anemone
Organism_taxid: 6108
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21codonplus
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe30

Molecule: Gfp-Like Non-Fluorescent Chromoprotein Fp595 Chai
Chain: B, D
Synonym: Asfp595
Engineered: Yes

Organism_scientific: Anemonia Sulcata
Organism_common: Snake-Locks Sea Anemone
Organism_taxid: 6108
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21codonplus
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe30
symmetry Space Group: C 2 2 21
R_factor 0.153 R_Free 0.179
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.174 126.500 94.108 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.30 Å
ligand NRQ enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructure and mechanism of the reversible photoswitch of a fluorescent protein., Andresen M, Wahl MC, Stiel AC, Grater F, Schafer LV, Trowitzsch S, Weber G, Eggeling C, Grubmuller H, Hell SW, Jakobs S, Proc Natl Acad Sci U S A 2005 Sep 13;102(37):13070-4. Epub 2005 Aug 31. PMID:16135569
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (183 Kb) [Save to disk]
  • Biological Unit Coordinates (2a50.pdb1.gz) 352 Kb
  • LPC: Ligand-Protein Contacts for 2A50
  • CSU: Contacts of Structural Units for 2A50
  • Likely Quarternary Molecular Structure file(s) for 2A50
  • Structure Factors (1847 Kb)
  • Retrieve 2A50 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A50 from S2C, [Save to disk]
  • Re-refined 2a50 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2A50 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2A50
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2A50, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a50_C] [2a50_B] [2a50_A] [2a50] [2a50_D]
  • SWISS-PROT database: [Q9GZ28]
  • Domain organization of [NFCP_ANESU] by SWISSPFAM
  • Other resources with information on 2A50
  • Community annotation for 2A50 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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