2A5U Transferase date Jul 01, 2005
title Crystal Structure Of Human Pi3kgamma Complexed With As605240
authors M.Camps, T.Ruckle, H.Ji, V.Ardissone, F.Rintelen, J.Shaw, C.Ferran C.Chabert, C.Gillieron, B.Francon, T.Martin, D.Gretener, D.Perri D.Leroy, P.A.Vitte, E.Hirsch, M.P.Wymann, R.Cirillo, M.K.Schwar C.Rommel
compound source
Molecule: Phosphatidylinositol-4,5-Bisphosphate 3-Kinase Ca Subunit, Gamma Isoform;
Chain: A
Fragment: P110 Subunit Gamma, Residues 143-1101
Synonym: Phosphatidylinositol 3-Kinase Catalytic Subunit, P P110 Subunit Gamma, Ptdins- 3-Kinase P110, Pi3k, Pi3kgamma;
Ec: 2.7.1.153
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Sf9
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
Expression_system_vector: Pvl1393
symmetry Space Group: C 1 2 1
R_factor 0.279 R_Free 0.351
crystal
cell
length a length b length c angle alpha angle beta angle gamma
140.446 67.406 105.971 90.00 96.35 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand QYT BindingDB enzyme Transferase E.C.2.7.1.153 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceBlockade of PI3Kgamma suppresses joint inflammation and damage in mouse models of rheumatoid arthritis., Camps M, Ruckle T, Ji H, Ardissone V, Rintelen F, Shaw J, Ferrandi C, Chabert C, Gillieron C, Francon B, Martin T, Gretener D, Perrin D, Leroy D, Vitte PA, Hirsch E, Wymann MP, Cirillo R, Schwarz MK, Rommel C, Nat Med 2005 Sep;11(9):936-43. Epub 2005 Aug 28. PMID:16127437
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (143 Kb) [Save to disk]
  • Biological Unit Coordinates (2a5u.pdb1.gz) 138 Kb
  • LPC: Ligand-Protein Contacts for 2A5U
  • CSU: Contacts of Structural Units for 2A5U
  • Likely Quarternary Molecular Structure file(s) for 2A5U
  • Structure Factors (208 Kb)
  • Retrieve 2A5U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A5U from S2C, [Save to disk]
  • Re-refined 2a5u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2A5U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2A5U
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2A5U, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a5u] [2a5u_A]
  • SWISS-PROT database: [P48736]
  • Domain organization of [PK3CG_HUMAN] by SWISSPFAM
  • Domains found in 2A5U: [PI3K_C2] [PI3K_rbd] [PI3Ka] [PI3Kc ] by SMART
  • Other resources with information on 2A5U
  • Community annotation for 2A5U at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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