2A7G Transferase date Jul 05, 2005
title On The Routine Use Of Soft X-Rays In Macromolecular Crystall Part III- The Optimal Data Collection Wavelength
authors C.Mueller-Dieckmann, S.Panjikar, P.A.Tucker, M.S.Weiss
compound source
Molecule: Thermolysin
Chain: E
Ec: 2.2.1.2
Organism_scientific: Bacillus Thermoproteolyticus
Organism_taxid: 1427
symmetry Space Group: P 61 2 2
R_factor 0.161 R_Free 0.189
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.990 92.990 130.210 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.85 Å
ligand ACY, CA, DMS, ZN enzyme Transferase E.C.2.2.1.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
E


Primary referenceOn the routine use of soft X-rays in macromolecular crystallography. Part III. The optimal data-collection wavelength., Mueller-Dieckmann C, Panjikar S, Tucker PA, Weiss MS, Acta Crystallogr D Biol Crystallogr 2005 Sep;61(Pt 9):1263-72. Epub 2005, Aug 16. PMID:16131760
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (2a7g.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 2A7G
  • CSU: Contacts of Structural Units for 2A7G
  • Likely Quarternary Molecular Structure file(s) for 2A7G
  • Structure Factors (203 Kb)
  • Retrieve 2A7G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A7G from S2C, [Save to disk]
  • Re-refined 2a7g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2A7G in 3D
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  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2A7G
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2A7G, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a7g_E] [2a7g]
  • SWISS-PROT database: [P00800]
  • Domain organization of [THER_BACTH] by SWISSPFAM
  • Other resources with information on 2A7G
  • Community annotation for 2A7G at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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