2A98 Transferase date Jul 11, 2005
title Crystal Structure Of The Catalytic Domain Of Human Inositol Trisphosphate 3-Kinase C
authors B.M.Hallberg, D.Ogg, M.Ehn, S.Graslund, M.Hammarstrom, T.Kotenyov P.Nilsson-Ehle, P.Nordlund, C.Persson, J.Sagemark, H.Schuler, P. A.G.Thorsell, C.Arrowsmith, A.Edwards, M.Sundstrom, J.Weigelt, Structural Genomics Consortium (Sgc)
compound source
Molecule: Inositol 1,4,5-Trisphosphate 3-Kinase C
Chain: A
Fragment: Kinase Domain
Ec: 2.7.1.127
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 Rosetta-2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic-Bsa4
symmetry Space Group: P 61 2 2
R_factor 0.218 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.720 87.720 174.940 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.60 Å
ligand I3P enzyme Transferase E.C.2.7.1.127 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (2a98.pdb1.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 2A98
  • CSU: Contacts of Structural Units for 2A98
  • Likely Quarternary Molecular Structure file(s) for 2A98
  • Structure Factors (96 Kb)
  • Retrieve 2A98 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A98 from S2C, [Save to disk]
  • Re-refined 2a98 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2A98 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2A98
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2A98, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a98] [2a98_A]
  • SWISS-PROT database: [Q96DU7]
  • Domain organization of [IP3KC_HUMAN] by SWISSPFAM
  • Other resources with information on 2A98
  • Community annotation for 2A98 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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