2AAV Protein Binding date Jul 14, 2005
title Solution Nmr Structure Of Filamin A Domain 17
authors F.Nakamura, R.Pudas, O.Heikkinen, P.Permi, I.Kilpelainen, A.D.Munday, J.H.Hartwig, T.P.Stossel, J.Ylanne
compound source
Molecule: Filamin A
Chain: A
Fragment: Filamin A Domain 17
Synonym: Alpha-Filamin, Filamin 1, Endothelial Actin- Binding Protein, Actin-Binding Protein 280, Abp-280, Nonmuscle Filamin;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Primary referenceThe structure of the GPIb-filamin A complex., Nakamura F, Pudas R, Heikkinen O, Permi P, Kilpelainen I, Munday AD, Hartwig JH, Stossel TP, Ylanne J, Blood. 2006 Mar 1;107(5):1925-32. Epub 2005 Nov 17. PMID:16293600
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (474 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2AAV
  • Original NMR restraints for 2AAV from PDB
  • Retrieve 2AAV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2AAV from S2C, [Save to disk]
  • View 2AAV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2AAV
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2AAV, from MSDmotif at EBI
  • Fold representative 2aav from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2aav] [2aav_A]
  • SWISS-PROT database: [P21333]
  • Belongs to the dystrophin (dystrophin) family according to TCDB.
  • Domain organization of [FLNA_HUMAN] by SWISSPFAM
  • Domain found in 2AAV: [IG_FLMN ] by SMART
  • Other resources with information on 2AAV
  • Community annotation for 2AAV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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