2AFF Cell Cycle date Jul 25, 2005
title The Solution Structure Of The Ki67fhahnifk(226-269)3p Compl
authors I.J.L.Byeon, H.Li, H.Song, A.M.Gronenborn, M.D.Tsai
compound source
Molecule: Antigen Ki-67
Chain: A
Fragment: Fha Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mki67
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Peg

Molecule: Mki67 Fha Domain Interacting Nucleolar Phosphopro
Chain: B
Fragment: Residues 226-269
Synonym: Nucleolar Protein Interacting With The Fha Domain Hnifk; Nucleolar Phosphoprotein Nopp34;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mki67ip
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Peg
methodSolution NMR
ligand SEP, TPO enzyme
Primary referenceSequential phosphorylation and multisite interactions characterize specific target recognition by the FHA domain of Ki67., Byeon IJ, Li H, Song H, Gronenborn AM, Tsai MD, Nat Struct Mol Biol. 2005 Nov;12(11):987-93. PMID:16244663
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3687 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 2AFF
  • CSU: Contacts of Structural Units for 2AFF
  • Retrieve 2AFF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2AFF from S2C, [Save to disk]
  • View 2AFF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2AFF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2AFF, from MSDmotif at EBI
  • Fold representative 2aff from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2aff_B] [2aff_A] [2aff]
  • SWISS-PROT database: [P46013] [Q9BYG3]
  • Domain organization of [KI67_HUMAN] [MK67I_HUMAN] by SWISSPFAM
  • Domain found in 2AFF: [FHA ] by SMART
  • Other resources with information on 2AFF
  • Community annotation for 2AFF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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