2ARF Hydrolase date Aug 19, 2005
title Solution Structure Of The Wilson Atpase N-Domain In The Presence Of Atp
authors O.Dmitriev, R.Tsivkovskii, F.Abildgaard, C.T.Morgan, J.L.Markley, S.Lutsenko
compound source
Molecule: Wilson Disease Atpase
Chain: A
Fragment: N-Domain
Synonym: Copper Pump 2, Wilson Disease-Associated Protein
Ec: 3.6.3.4
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Atp7b
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptyb12-N-Abd
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.6.3.4 BRENDA
Primary referenceSolution structure of the N-domain of Wilson disease protein: Distinct nucleotide-binding environment and effects of disease mutations., Dmitriev O, Tsivkovskii R, Abildgaard F, Morgan CT, Markley JL, Lutsenko S, Proc Natl Acad Sci U S A. 2006 Apr 4;103(14):5302-7. Epub 2006 Mar 27. PMID:16567646
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (414 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2ARF
  • Retrieve 2ARF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ARF from S2C, [Save to disk]
  • View 2ARF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ARF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2ARF, from MSDmotif at EBI
  • Fold representative 2arf from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2arf_A] [2arf]
  • SWISS-PROT database: [P35670]
  • Belongs to the p-type atpase (p-atpase) superfamily according to TCDB.
  • Domain organization of [ATP7B_HUMAN] by SWISSPFAM
  • Other resources with information on 2ARF
  • Community annotation for 2ARF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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