2ASJ	oxoG-modified Preinsertion Binary Complex	date
authors	Rechkoblit, O., Malinina, L., Cheng, Y., Kuryavyi, V., Broyde, S., Geacintov, N.E., Patel, D.J.
compound		source
symmetry		R_factor R_Free 0.31751
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.35
ligand	CA, DDG	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Stepwise Translocation of Dpo4 Polymerase during Error-Free Bypass of an oxoG Lesion., Rechkoblit O, Malinina L, Cheng Y, Kuryavyi V, Broyde S, Geacintov NE, Patel DJ, PLoS Biol. 2006 Jan 3;4(1):e11. PMID:16379496

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (141 Kb) [Save to disk] Biological Unit Coordinates (2asj.pdb1.gz) 68 Kb Biological Unit Coordinates (2asj.pdb2.gz) 68 Kb LPC: Ligand-Protein Contacts for 2ASJ CSU: Contacts of Structural Units for 2ASJ Likely Quarternary Molecular Structure file(s) for 2ASJ Structure Factors (578 Kb) Retrieve 2ASJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2ASJ from S2C, [Save to disk] Re-refined 2asj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2ASJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2ASJ

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 2ASJ, from MSDmotif at EBI Fold representative 2asj from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2asj_A] [2asj_H] [2asj_D] [2asj] [2asj_B] [2asj_J] [2asj_E] SWISS-PROT database: [Q97W02] Domain organization of [DPO42_SULSO] by SWISSPFAM

Other resources with information on 2ASJ

Community annotation for 2ASJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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