2ASJ oxoG-modified Preinsertion Binary Complex date
authors Rechkoblit, O., Malinina, L., Cheng, Y., Kuryavyi, V., Broyde, S., Geacintov, N.E., Patel, D.J.
compound source
R_Free 0.31751
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.35
ligand CA, DDG enzyme
A, B

Primary referenceStepwise Translocation of Dpo4 Polymerase during Error-Free Bypass of an oxoG Lesion., Rechkoblit O, Malinina L, Cheng Y, Kuryavyi V, Broyde S, Geacintov NE, Patel DJ, PLoS Biol. 2006 Jan 3;4(1):e11. PMID:16379496
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (141 Kb) [Save to disk]
  • Biological Unit Coordinates (2asj.pdb1.gz) 68 Kb
  • Biological Unit Coordinates (2asj.pdb2.gz) 68 Kb
  • LPC: Ligand-Protein Contacts for 2ASJ
  • CSU: Contacts of Structural Units for 2ASJ
  • Likely Quarternary Molecular Structure file(s) for 2ASJ
  • Structure Factors (578 Kb)
  • Retrieve 2ASJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ASJ from S2C, [Save to disk]
  • Re-refined 2asj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ASJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ASJ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2ASJ, from MSDmotif at EBI
  • Fold representative 2asj from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2asj_A] [2asj_H] [2asj_D] [2asj] [2asj_B] [2asj_J] [2asj_E]
  • SWISS-PROT database: [Q97W02]
  • Domain organization of [DPO42_SULSO] by SWISSPFAM
  • Other resources with information on 2ASJ
  • Community annotation for 2ASJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science