2AWI Transcription date Sep 01, 2005
title Structure Of Prgx Y153c Mutant
authors K.Shi, C.K.Brown, Z.Y.Gu, B.K.Kozlowicz, G.M.Dunny, D.H.Ohlendorf C.A.Earhart
compound source
Molecule: Prgx
Chain: A, B, C, D, E, F, G, H, I, J, K, L
Engineered: Yes
Mutation: Yes
 Organism_scientific: Enterococcus Faecalis
Organism_taxid: 1351
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.218 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.527 134.366 195.199 90.00 100.28 90.00
method X-Ray Diffractionresolution 2.25 Å
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Primary referenceStructure of peptide sex pheromone receptor PrgX and PrgX/pheromone complexes and regulation of conjugation in Enterococcus faecalis., Shi K, Brown CK, Gu ZY, Kozlowicz BK, Dunny GM, Ohlendorf DH, Earhart CA, Proc Natl Acad Sci U S A. 2005 Dec 20;102(51):18596-601. Epub 2005 Dec 8. PMID:16339309
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (604 Kb) [Save to disk]
  • Biological Unit Coordinates (2awi.pdb1.gz) 202 Kb
  • Biological Unit Coordinates (2awi.pdb2.gz) 199 Kb
  • Biological Unit Coordinates (2awi.pdb3.gz) 196 Kb
  • LPC: Ligand-Protein Contacts for 2AWI
  • CSU: Contacts of Structural Units for 2AWI
  • Likely Quarternary Molecular Structure file(s) for 2AWI
  • Structure Factors (1775 Kb)
  • Retrieve 2AWI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2AWI from S2C, [Save to disk]
  • Re-refined 2awi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2AWI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2AWI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2AWI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2awi_B] [2awi_L] [2awi_F] [2awi_H] [2awi_D] [2awi_G] [2awi_I] [2awi_J] [2awi_E] [2awi_K] [2awi_C] [2awi_A] [2awi]
  • SWISS-PROT database: [Q04114]
  • Domain organization of [Q04114_ENTFA] by SWISSPFAM
  • Domain found in 2AWI: [HTH_XRE ] by SMART
    • Other resources with information on 2AWI
  • Community annotation for 2AWI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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