2AX2 Lyase date Sep 02, 2005
title Production And X-Ray Crystallographic Analysis Of Fully Deut Human Carbonic Anhydrase II
authors M.Budayova-Spano, S.Z.Fisher, M.T.Dauvergne, D.N.Silverman, D.A. R.M.Mckenna
compound source
Molecule: Carbonic Anhydrase II
Chain: A
Synonym: Carbonate Dehydratase II, Ca-II, Carbonic Anhydras
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca2
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet
symmetry Space Group: P 1 21 1
R_factor 0.195 R_Free 0.206
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.149 41.124 72.014 90.00 104.37 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceProduction and X-ray crystallographic analysis of fully deuterated human carbonic anhydrase II., Budayova-Spano M, Fisher SZ, Dauvergne MT, Agbandje-McKenna M, Silverman DN, Myles DA, McKenna R, Acta Crystallograph Sect F Struct Biol Cryst Commun. 2006 Jan 1;62(Pt, 1):6-9. Epub 2005 Dec 16. PMID:16511248
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (2ax2.pdb1.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 2AX2
  • CSU: Contacts of Structural Units for 2AX2
  • Likely Quarternary Molecular Structure file(s) for 2AX2
  • Structure Factors (317 Kb)
  • Retrieve 2AX2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2AX2 from S2C, [Save to disk]
  • Re-refined 2ax2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2AX2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2AX2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2AX2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ax2_A] [2ax2]
  • SWISS-PROT database: [P00918]
  • Domain organization of [CAH2_HUMAN] by SWISSPFAM
  • Domain found in 2AX2: [Carb_anhydrase ] by SMART
  • Other resources with information on 2AX2
  • Community annotation for 2AX2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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