2B3J	Hydrolase Rna	date	Sep 20, 2005
title	Crystal Structure Of Staphylococcus Aureus Trna Adenosine De Tada, In Complex With Rna
authors	H.C.Losey, A.J.Ruthenburg, G.L.Verdine
compound		source
Molecule: Anticodon Stem-Loop Of T-Rna-Arg2 (Nucleotides 27 Chain: E, F, G, H Engineered: Yes		Synthetic: Yes Other_details: The Sequence Is Derived From S. Aureus T-Rna Nucleotides 27-42;
Molecule: Trna Adenosine Deaminase Chain: A, B, C, D Synonym: Similar To Cytosine Deaminase, Tada Ec: 3.5.4.- Engineered: Yes		Organism_scientific: Staphylococcus Aureus Subsp. Aureus Mu Organism_taxid: 158878 Strain: Subsp. Aureus Mu50 Gene: Tada Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta(De3)Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
symmetry	Space Group: P 21 21 21	R_factor 0.215 R_Free 0.242
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.055 89.029 119.133 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	GOL, P5P, ZN	enzyme	Hydrolase E.C.3.5.4 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Crystal structure of Staphylococcus aureus tRNA adenosine deaminase TadA in complex with RNA., Losey HC, Ruthenburg AJ, Verdine GL, Nat Struct Mol Biol. 2006 Feb;13(2):153-9. Epub 2006 Jan 15. PMID:16415880

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk] Biological Unit Coordinates (2b3j.pdb1.gz) 61 Kb Biological Unit Coordinates (2b3j.pdb2.gz) 59 Kb LPC: Ligand-Protein Contacts for 2B3J CSU: Contacts of Structural Units for 2B3J Likely Quarternary Molecular Structure file(s) for 2B3J Structure Factors (456 Kb) Retrieve 2B3J in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2B3J from S2C, [Save to disk] Re-refined 2b3j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2B3J in 3D

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Visual 3D analysis of 2B3J

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2B3J, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2b3j_G] [2b3j_C] [2b3j_F] [2b3j_B] [2b3j_E] [2b3j_A] [2b3j] [2b3j_H] [2b3j_D] SWISS-PROT database: [Q99W51] Domain organization of [Q99W51_STAAM] by SWISSPFAM

Other resources with information on 2B3J

Community annotation for 2B3J at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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