2B7S Oxidoreductase date Oct 05, 2005
title R381k Mutant Of Flavocytochrome C3
authors K.L.Pankhurst, C.G.Mowat, E.L.Rothery, C.S.Miles, M.D.Walkinshaw G.A.Reid, S.K.Chapman
compound source
Molecule: Fumarate Reductase Flavoprotein Subunit
Chain: A
Synonym: Flavocytochrome C3, Flavocytochrome C, Fcc3
Ec: 1.3.99.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Shewanella Frigidimarina
Organism_taxid: 56812
Gene: Fcc
Expression_system: Shewanella Frigidimarina
Expression_system_taxid: 56812
Expression_system_strain: Eg301
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmmb503eh
symmetry Space Group: P 1 21 1
R_factor 0.144 R_Free 0.197
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.228 91.362 78.193 90.00 91.26 90.00
method X-Ray Diffractionresolution 2.12 Å
ligand FAD, FUM, HEM, NA enzyme Oxidoreductase E.C.1.3.99.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA proton delivery pathway in the soluble fumarate reductase from Shewanella frigidimarina., Pankhurst KL, Mowat CG, Rothery EL, Hudson JM, Jones AK, Miles CS, Walkinshaw MD, Armstrong FA, Reid GA, Chapman SK, J Biol Chem. 2006 Jul 21;281(29):20589-97. Epub 2006 May 12. PMID:16699170
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]
  • Biological Unit Coordinates (2b7s.pdb1.gz) 103 Kb
  • LPC: Ligand-Protein Contacts for 2B7S
  • CSU: Contacts of Structural Units for 2B7S
  • Likely Quarternary Molecular Structure file(s) for 2B7S
  • Structure Factors (276 Kb)
  • Retrieve 2B7S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2B7S from S2C, [Save to disk]
  • Re-refined 2b7s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2B7S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2B7S
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2B7S, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2b7s] [2b7s_A]
  • SWISS-PROT database: [P0C278]
  • Domain organization of [FRDA_SHEFR] by SWISSPFAM
  • Other resources with information on 2B7S
  • Community annotation for 2B7S at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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